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Synthesizing population time-series data from the USA Long Term Ecological Research Network

🔗 Introduction The availability of large quantities of freely available data is revolutionizing the world of ecological research. Open data maximizes the opportunities to perform comparative analyses and meta-analyses. Such synthesis efforts will increasingly exploit “population data”, which we define here as time series of population abundance. Such population data plays a central role in testing ecological theory and guiding management decisions. One of the richest sources of open access population data is the USA Long Term Ecological Research (LTER) Network....

Community Call - Reproducible Workflows at Scale with drake

Ambitious workflows in R, such as machine learning analyses, can be difficult to manage. A single round of computation can take several hours to complete, and routine updates to the code and data tend to invalidate hard-earned results. You can enhance the maintainability, hygiene, speed, scale, and reproducibility of such projects with the drake R package. drake resolves the dependency structure of your analysis pipeline, skips tasks that are already up to date, executes the rest with optional distributed computing, and organizes the output so you rarely have to think about data files....

rOpenSci Hiring for New Position in Statistical Software Testing and Peer Review

Are you passionate about statistical methods and software? If so we would love for you to join our team to dig deep into the world of statistical software packages. You’ll develop standards for evaluating and reviewing statistical tools, publish, and work closely with an international team of experts to set up a new software review system. We are seeking a creative, dedicated, and collaborative software research scientist to support a two-year project in launching a new software peer-review initiative....

Aggregating spatial data with the grainchanger package

The grainchanger package provides functionality for data aggregation to a coarser resolution via moving-window or direct methods. 🔗 Why do we need new methods for data aggregation? As landscape ecologists and macroecologists, we often need to aggregate data in order to harmonise datasets. In doing so, we often lose a lot of information about the spatial structure and environmental heterogeneity of data measured at finer resolution. The issues around scale disconnects are both conceptual and practical:...

rOpenSci Announces $678K Award from the Sloan Foundation to Expand Software Peer Review

We’re delighted to announce that we have received new funding from the Alfred P. Sloan Foundation. The $678K grant, awarded through the Foundation’s Data & Computational Research program, will be used to expand our efforts in software peer review. Software peer review has become a core part of rOpenSci, helping improve scientific software quality, drive best engineering practices into scientific communities, and building community and collaboration through open, constructive reviews. We’re excited to expand our work in this important area....

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